Welcome to FRED's documentation!
================================

.. |arrow| image:: _static/rightarrowblue.gif

|arrow| :ref:`new version 3.76 <latestRelease>` available now!!!

.. toctree::
   :maxdepth: 1
   :caption: Getting Started with FRED:

   Getting Started/Introduction
   Getting Started/Collaboration
   Getting Started/Applications
   Getting Started/Performance Summary
   Getting Started/Citation
   Getting Started/Changelog
   Getting Started/Tools



.. toctree::
   :hidden:

   genindex


.. toctree::
   :maxdepth: 2
   :caption: Download:

   Download/Licences
   Download/Registration
   Download/Latest release

.. toctree::
   :maxdepth: 2
   :caption: Setting up FRED:

   Setting Up/Installation
   Setting Up/Verification
   Setting Up/GPU tuning

.. toctree::
   :maxdepth: 2
   :caption: Support:

   Support/Support


.. toctree::
   :maxdepth: 1
   :caption: FRED Control:

   Control/Working Directories
   Control/Input Parameters
   Control/Geometry Definition
   Control/Source Definition
   Control/Material Definition
   Control/Scoring Quantities
   Control/Scoring Particles
   Control/Delivery Manager
   Control/Variance Reduction
   Control/Physics Control
   Control/Radiobiology
   Control/Control Options
   Control/Command Line Options
   Control/Plugin Interface
   Control/Meta input using Python

.. toctree::
   :maxdepth: 1
   :caption: Examples:

   Examples/SimpleSimulationAndAnalysisImages/Simple simulation and analysis
   Examples/PencilPeamInAir/Pencil beam in air
   Examples/PencilBeamInWaterPhantom/Pencil beam in water phantom
   Examples/SpotsGallery/Spots gallery
   Examples/SingleRoundBeamOnHeadPhantom/Single round beam on head phantom
   Examples/Spiralling spots/Spiralling spots
   Examples/Chessboard/Chessboard
   Examples/Radiation Hazard/Radiation Hazard
   Examples/McNamara RBE/McNamara RBE
   Examples/PatientWorkflow/Patient Workflow
   Examples/OverridingMaterials/Override
   Examples/ReassignHU/ReassignHU